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how to get MCMC trajectory

Posted: Thu Aug 04, 2016 11:05 am
by guobl
Hi Chris,
is there an option in runmlwin to get MCMC diagnosis plot for a parameter like what we could have when run MLwiN? sorry I can't find the code yet.
thanks, Boliang

Re: how to get MCMC trajectory

Posted: Thu Aug 04, 2016 12:11 pm
by ChrisCharlton
We provide the -mcmcsum- command for this (see http://www.bristol.ac.uk/cmm/media/runmlwin/mcmcsum.pdf). For an example of its use for displaying the trajectories for all parameters in the model see http://www.bristol.ac.uk/cmm/media/runm ... delling.do.

Re: how to get MCMC trajectory

Posted: Thu Aug 04, 2016 12:42 pm
by guobl
thanks Chris, I got the nice plot now.
boliang