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Hello! I was wondering if there is a command in runmlwin for the calculation of MORs and the associated 95% credible intervals? Thanks!

I am not familiar with the median odds ratio and there is not a -runmlwin- option to calculate this directly, however you should be able to use the formula given at the end of http://fmwww.bc.edu/repec/bocode/x/xtmrho.html to calculate it directly. The paper at https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2566165/ suggests that if you have run your model with MCMC you can calculate the credible intervals by applying this formula to 2.5th and 97.5th centiles of the chain (available via the -mcmcsum- command).