how to get MCMC trajectory

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guobl
Posts: 22
Joined: Wed Nov 18, 2009 12:25 pm

how to get MCMC trajectory

Post by guobl »

Hi Chris,
is there an option in runmlwin to get MCMC diagnosis plot for a parameter like what we could have when run MLwiN? sorry I can't find the code yet.
thanks, Boliang
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ChrisCharlton
Posts: 1384
Joined: Mon Oct 19, 2009 10:34 am

Re: how to get MCMC trajectory

Post by ChrisCharlton »

We provide the -mcmcsum- command for this (see http://www.bristol.ac.uk/cmm/media/runmlwin/mcmcsum.pdf). For an example of its use for displaying the trajectories for all parameters in the model see http://www.bristol.ac.uk/cmm/media/runm ... delling.do.
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guobl
Posts: 22
Joined: Wed Nov 18, 2009 12:25 pm

Re: how to get MCMC trajectory

Post by guobl »

thanks Chris, I got the nice plot now.
boliang
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